- ModuleInducer: Finding higher-order relationships between landmarks in DNA sequences
- ACSEA: Annotation Concept Synthesis and Enrichment Analysis Seed: Inference and matching of RNA secondary structure motifs using suffix arrays.
- Profile-Dynalign: Simultaneous alignment and secondary structure prediction of RNA profiles.
- eXtended-Dynalign: Simultaneous alignment and secondary structure prediction of three RNA sequences.
- Suffix tree library written in Java by Daniela Cernea.
[ Source code | Documentation | Jar ]
