Student Presentations

CSI 5180 - Machine Learning for Bioinformatics

Student Presentation

Students	Paper	DOI
Jie Wang	Tan and Cahan (2019)	DOI
Steven Sun & Hong Qian Zhao	Xia et al. (2024)	DOI
Siavash Khalaj	Roche et al. (2024)	DOI
Yi Chen	Wang et al. (2020)	DOI

References

Roche, Rahmatullah, Bernard Moussad, Md Hossain Shuvo, Sumit Tarafder, and Debswapna Bhattacharya. 2024. “EquiPNAS: improved protein–nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks.” Nucleic Acids Research 52 (5): e27–27. https://doi.org/10.1093/nar/gkae039.

Tan, Yuqi, and Patrick Cahan. 2019. “SingleCellNet: A Computational Tool to Classify Single Cell RNA-Seq Data Across Platforms and Across Species.” Cell Systems 9 (2): 207–213.e2. https://doi.org/10.1016/j.cels.2019.06.004.

Wang, Yu, Junpeng Bao, Jianqiang Du, and Yongfeng Li. 2020. “Rapid Detection and Prediction of Influenza A Subtype using Deep Convolutional Neural Network based Ensemble Learning.” Proceedings of the 2020 10th International Conference on Bioscience, Biochemistry and Bioinformatics, 47–51. https://doi.org/10.1145/3386052.3386053.

Xia, Xiaoqiong, Chaoyu Zhu, Fan Zhong, and Lei Liu. 2024. “TransCDR: a deep learning model for enhancing the generalizability of drug activity prediction through transfer learning and multimodal data fusion.” BMC Biology 22 (1): 227. https://doi.org/10.1186/s12915-024-02023-8.